Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.08■□□□□ 0.01
Trim34aQ99PP6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim34aQ99PP6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim34aQ99PP6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.08■□□□□ 0.01
Trim34aQ99PP6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim34aQ99PP6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim34aQ99PP6 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trim34aQ99PP6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim34aQ99PP6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Trim34aQ99PP6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim34aQ99PP6 Gm14460-201ENSMUST00000121511 639 ntBASIC15.08■□□□□ 0
Trim34aQ99PP6 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Gm44882-201ENSMUST00000205702 802 ntBASIC15.08■□□□□ 0
Trim34aQ99PP6 Gm7395-201ENSMUST00000216059 1045 ntBASIC15.08■□□□□ 0
Trim34aQ99PP6 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.08■□□□□ 0
Trim34aQ99PP6 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.08■□□□□ 0
Trim34aQ99PP6 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trim34aQ99PP6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trim34aQ99PP6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim34aQ99PP6 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.08■□□□□ 0
Trim34aQ99PP6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC15.07■□□□□ 0
Trim34aQ99PP6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Gm15573-201ENSMUST00000119487 540 ntBASIC15.07■□□□□ 0
Trim34aQ99PP6 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.07■□□□□ 0
Trim34aQ99PP6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Gm9132-201ENSMUST00000210182 832 ntBASIC15.07■□□□□ 0
Trim34aQ99PP6 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.07■□□□□ 0
Trim34aQ99PP6 CT030637.1-201ENSMUST00000228016 669 ntBASIC15.07■□□□□ 0
Trim34aQ99PP6 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.07■□□□□ 0
Trim34aQ99PP6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim34aQ99PP6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.07■□□□□ 0
Trim34aQ99PP6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.07■□□□□ 0
Trim34aQ99PP6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim34aQ99PP6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.06■□□□□ 0
Trim34aQ99PP6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Trim34aQ99PP6 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC15.06■□□□□ 0
Trim34aQ99PP6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC15.06■□□□□ 0
Trim34aQ99PP6 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trim34aQ99PP6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Trim34aQ99PP6 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trim34aQ99PP6 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 Gm45550-201ENSMUST00000209380 946 ntBASIC15.06■□□□□ 0
Trim34aQ99PP6 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.06■□□□□ 0
Trim34aQ99PP6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim34aQ99PP6 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms