Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Trim8Q99PJ2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gm2231-201ENSMUST00000125661 612 ntBASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gm7029-201ENSMUST00000173226 450 ntBASIC12.03□□□□□ -0.48
Trim8Q99PJ2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gm9022-201ENSMUST00000182482 992 ntBASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gm27892-201ENSMUST00000185017 106 ntBASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gm19163-201ENSMUST00000223313 780 ntBASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Trim8Q99PJ2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim8Q99PJ2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim8Q99PJ2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim8Q99PJ2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trim8Q99PJ2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim8Q99PJ2 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.02□□□□□ -0.48
Trim8Q99PJ2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim8Q99PJ2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Trim8Q99PJ2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Gm10012-201ENSMUST00000078252 192 ntBASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms