Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.13□□□□□ -0.47
Cdh23Q99PF4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Gm12418-201ENSMUST00000118116 942 ntBASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Gm14395-201ENSMUST00000120494 563 ntBASIC12.12□□□□□ -0.47
Cdh23Q99PF4 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Gm6331-201ENSMUST00000217890 450 ntBASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.12□□□□□ -0.47
Cdh23Q99PF4 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Gm17825-201ENSMUST00000206836 794 ntBASIC12.12□□□□□ -0.47
Cdh23Q99PF4 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Gm15982-201ENSMUST00000121681 554 ntBASIC12.12□□□□□ -0.47
Cdh23Q99PF4 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Gm18711-201ENSMUST00000199341 750 ntBASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh23Q99PF4 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Gm15615-201ENSMUST00000118876 198 ntBASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Gm9081-201ENSMUST00000182346 991 ntBASIC12.11□□□□□ -0.47
Cdh23Q99PF4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Gm38117-201ENSMUST00000194653 939 ntBASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Gm7504-201ENSMUST00000201449 424 ntBASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.11□□□□□ -0.47
Cdh23Q99PF4 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh23Q99PF4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm11660-201ENSMUST00000120955 412 ntBASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Gm44216-201ENSMUST00000203942 157 ntBASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh23Q99PF4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms