Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm4726-201ENSMUST00000135604 736 ntBASIC14.42□□□□□ -0.1
Hdac9Q99N13 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm6019-201ENSMUST00000148369 736 ntBASIC14.42□□□□□ -0.1
Hdac9Q99N13 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm22144-201ENSMUST00000157402 102 ntBASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.42□□□□□ -0.1
Hdac9Q99N13 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm9797-202ENSMUST00000218003 294 ntBASIC14.42□□□□□ -0.1
Hdac9Q99N13 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm5705-201ENSMUST00000066241 711 ntBASIC14.42□□□□□ -0.1
Hdac9Q99N13 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.42□□□□□ -0.1
Hdac9Q99N13 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.41□□□□□ -0.1
Hdac9Q99N13 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.41□□□□□ -0.1
Hdac9Q99N13 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Hdac9Q99N13 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.41□□□□□ -0.1
Hdac9Q99N13 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.41□□□□□ -0.1
Hdac9Q99N13 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Gm11246-201ENSMUST00000120880 345 ntBASIC14.41□□□□□ -0.1
Hdac9Q99N13 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.41□□□□□ -0.1
Hdac9Q99N13 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.41□□□□□ -0.1
Hdac9Q99N13 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.41□□□□□ -0.1
Hdac9Q99N13 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.41□□□□□ -0.1
Hdac9Q99N13 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.41□□□□□ -0.1
Hdac9Q99N13 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.41□□□□□ -0.1
Hdac9Q99N13 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Hdac9Q99N13 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.41□□□□□ -0.1
Hdac9Q99N13 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.4□□□□□ -0.1
Hdac9Q99N13 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Gm16397-201ENSMUST00000122201 494 ntBASIC14.4□□□□□ -0.1
Hdac9Q99N13 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.4□□□□□ -0.1
Hdac9Q99N13 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hdac9Q99N13 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.4□□□□□ -0.1
Hdac9Q99N13 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.4□□□□□ -0.1
Hdac9Q99N13 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.4□□□□□ -0.1
Hdac9Q99N13 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.4□□□□□ -0.1
Hdac9Q99N13 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms