Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.96□□□□□ -0.5
Msh4Q99MT2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Msh4Q99MT2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msh4Q99MT2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msh4Q99MT2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Gm11964-201ENSMUST00000120982 444 ntBASIC11.95□□□□□ -0.5
Msh4Q99MT2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Gm9630-201ENSMUST00000178304 885 ntBASIC11.95□□□□□ -0.5
Msh4Q99MT2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.95□□□□□ -0.5
Msh4Q99MT2 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.95□□□□□ -0.5
Msh4Q99MT2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Gm21769-201ENSMUST00000211922 111 ntBASIC11.95□□□□□ -0.5
Msh4Q99MT2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Msh4Q99MT2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.95□□□□□ -0.5
Msh4Q99MT2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.95□□□□□ -0.5
Msh4Q99MT2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msh4Q99MT2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Paupar-201ENSMUST00000194826 3482 ntBASIC11.94□□□□□ -0.5
Msh4Q99MT2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Gm45925-201ENSMUST00000218882 744 ntBASIC11.94□□□□□ -0.5
Msh4Q99MT2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.94□□□□□ -0.5
Msh4Q99MT2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh4Q99MT2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh4Q99MT2 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.93□□□□□ -0.5
Msh4Q99MT2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh4Q99MT2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh4Q99MT2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh4Q99MT2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh4Q99MT2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms