Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Gm12857-201ENSMUST00000117678 592 ntBASIC14.38□□□□□ -0.11
Hps4Q99KG7 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.38□□□□□ -0.11
Hps4Q99KG7 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.38□□□□□ -0.11
Hps4Q99KG7 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Gm45770-201ENSMUST00000212105 616 ntBASIC14.38□□□□□ -0.11
Hps4Q99KG7 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.38□□□□□ -0.11
Hps4Q99KG7 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hps4Q99KG7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.37□□□□□ -0.11
Hps4Q99KG7 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Gm3508-201ENSMUST00000186012 792 ntBASIC14.37□□□□□ -0.11
Hps4Q99KG7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.37□□□□□ -0.11
Hps4Q99KG7 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.37□□□□□ -0.11
Hps4Q99KG7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hps4Q99KG7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.36□□□□□ -0.11
Hps4Q99KG7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.36□□□□□ -0.11
Hps4Q99KG7 Gm23085-201ENSMUST00000157849 293 ntBASIC14.36□□□□□ -0.11
Hps4Q99KG7 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Gm8100-201ENSMUST00000182906 988 ntBASIC14.36□□□□□ -0.11
Hps4Q99KG7 Gm7467-201ENSMUST00000185173 652 ntBASIC14.36□□□□□ -0.11
Hps4Q99KG7 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hps4Q99KG7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hps4Q99KG7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms