Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clip1Q922J3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clip1Q922J3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Clip1Q922J3 Gm19287-201ENSMUST00000203190 358 ntBASIC19.08■□□□□ 0.65
Clip1Q922J3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Clip1Q922J3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC19.08■□□□□ 0.65
Clip1Q922J3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC19.08■□□□□ 0.65
Clip1Q922J3 CT030637.1-201ENSMUST00000228016 669 ntBASIC19.08■□□□□ 0.65
Clip1Q922J3 Snora73b-201ENSMUST00000083419 205 ntBASIC19.08■□□□□ 0.65
Clip1Q922J3 Gm43807-201ENSMUST00000200678 1781 ntBASIC19.08■□□□□ 0.65
Clip1Q922J3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clip1Q922J3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clip1Q922J3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clip1Q922J3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Clip1Q922J3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clip1Q922J3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clip1Q922J3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
Clip1Q922J3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Clip1Q922J3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Clip1Q922J3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Clip1Q922J3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Clip1Q922J3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clip1Q922J3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Clip1Q922J3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Clip1Q922J3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clip1Q922J3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
Clip1Q922J3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clip1Q922J3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clip1Q922J3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clip1Q922J3 Gm22711-201ENSMUST00000116890 133 ntBASIC19.07■□□□□ 0.64
Clip1Q922J3 Gm15352-201ENSMUST00000118696 270 ntBASIC19.07■□□□□ 0.64
Clip1Q922J3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Clip1Q922J3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC19.07■□□□□ 0.64
Clip1Q922J3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC19.07■□□□□ 0.64
Clip1Q922J3 Gm10731-201ENSMUST00000181171 448 ntBASIC19.07■□□□□ 0.64
Clip1Q922J3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC19.07■□□□□ 0.64
Clip1Q922J3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC19.07■□□□□ 0.64
Clip1Q922J3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC19.07■□□□□ 0.64
Clip1Q922J3 CT485607.1-201ENSMUST00000216100 85 ntBASIC19.07■□□□□ 0.64
Clip1Q922J3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clip1Q922J3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clip1Q922J3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC19.07■□□□□ 0.64
Clip1Q922J3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clip1Q922J3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clip1Q922J3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clip1Q922J3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clip1Q922J3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC19.06■□□□□ 0.64
Clip1Q922J3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC19.06■□□□□ 0.64
Clip1Q922J3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC19.06■□□□□ 0.64
Clip1Q922J3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Clip1Q922J3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Clip1Q922J3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Clip1Q922J3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Clip1Q922J3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip1Q922J3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Clip1Q922J3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Clip1Q922J3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Clip1Q922J3 Gm15566-201ENSMUST00000121130 590 ntBASIC19.06■□□□□ 0.64
Clip1Q922J3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
Clip1Q922J3 Gm38117-201ENSMUST00000194653 939 ntBASIC19.06■□□□□ 0.64
Clip1Q922J3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Clip1Q922J3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Clip1Q922J3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Clip1Q922J3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Clip1Q922J3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC19.05■□□□□ 0.64
Clip1Q922J3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Clip1Q922J3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Gm11956-201ENSMUST00000119525 512 ntBASIC19.05■□□□□ 0.64
Clip1Q922J3 Gm14585-201ENSMUST00000120713 634 ntBASIC19.05■□□□□ 0.64
Clip1Q922J3 Gm11246-201ENSMUST00000120880 345 ntBASIC19.05■□□□□ 0.64
Clip1Q922J3 Gm22138-201ENSMUST00000158748 128 ntBASIC19.05■□□□□ 0.64
Clip1Q922J3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC19.05■□□□□ 0.64
Clip1Q922J3 Gm7600-201ENSMUST00000209657 785 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms