Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha8Q91Y12 Gm45880-201ENSMUST00000213041 853 ntBASIC11.96□□□□□ -0.49
Pcdha8Q91Y12 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdha8Q91Y12 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha8Q91Y12 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha8Q91Y12 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha8Q91Y12 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha8Q91Y12 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pcdha8Q91Y12 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha8Q91Y12 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha8Q91Y12 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm12058-201ENSMUST00000118614 437 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm13316-201ENSMUST00000140537 691 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm17420-201ENSMUST00000164753 153 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm18304-201ENSMUST00000189162 546 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm37201-201ENSMUST00000191845 523 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm42627-201ENSMUST00000197347 224 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm10076-201ENSMUST00000073238 384 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha8Q91Y12 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Mospd4-201ENSMUST00000180618 576 ntBASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdha8Q91Y12 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms