Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Gm9361-201ENSMUST00000198695 1507 ntBASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb8Q91XZ2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Mir1247-201ENSMUST00000116706 82 ntBASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Gm12058-201ENSMUST00000118614 437 ntBASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Gm37201-201ENSMUST00000191845 523 ntBASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Cog3-203ENSMUST00000227473 4197 ntBASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb8Q91XZ2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Gm5187-201ENSMUST00000117317 991 ntBASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Gm13875-201ENSMUST00000120162 282 ntBASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Gm14999-201ENSMUST00000121039 624 ntBASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Gm43133-201ENSMUST00000197472 463 ntBASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb8Q91XZ2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms