Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.15□□□□□ -0.46
Vsx1Q91V10 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.15□□□□□ -0.46
Vsx1Q91V10 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Gm12196-201ENSMUST00000120954 262 ntBASIC12.15□□□□□ -0.46
Vsx1Q91V10 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.15□□□□□ -0.46
Vsx1Q91V10 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Gm4482-201ENSMUST00000200876 742 ntBASIC12.15□□□□□ -0.46
Vsx1Q91V10 Gm45398-201ENSMUST00000210561 165 ntBASIC12.15□□□□□ -0.46
Vsx1Q91V10 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vsx1Q91V10 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.47
Vsx1Q91V10 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vsx1Q91V10 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vsx1Q91V10 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.14□□□□□ -0.47
Vsx1Q91V10 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm12314-201ENSMUST00000118104 538 ntBASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm37028-201ENSMUST00000194276 107 ntBASIC12.14□□□□□ -0.47
Vsx1Q91V10 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm17827-201ENSMUST00000211825 742 ntBASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm270-201ENSMUST00000223010 976 ntBASIC12.14□□□□□ -0.47
Vsx1Q91V10 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Snora73b-201ENSMUST00000083419 205 ntBASIC12.14□□□□□ -0.47
Vsx1Q91V10 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.14□□□□□ -0.47
Vsx1Q91V10 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx1Q91V10 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.13□□□□□ -0.47
Vsx1Q91V10 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx1Q91V10 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms