Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Q8VDP2 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Q8VDP2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Q8VDP2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Q8VDP2 Gm15693-201ENSMUST00000120470 637 ntBASIC11.95□□□□□ -0.5
Q8VDP2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Q8VDP2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.95□□□□□ -0.5
Q8VDP2 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.95□□□□□ -0.5
Q8VDP2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.95□□□□□ -0.5
Q8VDP2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Q8VDP2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Q8VDP2 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Q8VDP2 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Q8VDP2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Q8VDP2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q8VDP2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Q8VDP2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Q8VDP2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.94□□□□□ -0.5
Q8VDP2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Q8VDP2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Q8VDP2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Q8VDP2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Q8VDP2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Gm6415-201ENSMUST00000118488 348 ntBASIC11.94□□□□□ -0.5
Q8VDP2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.94□□□□□ -0.5
Q8VDP2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.94□□□□□ -0.5
Q8VDP2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Gm27920-201ENSMUST00000183953 96 ntBASIC11.94□□□□□ -0.5
Q8VDP2 Gm27321-201ENSMUST00000185021 205 ntBASIC11.94□□□□□ -0.5
Q8VDP2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.94□□□□□ -0.5
Q8VDP2 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.94□□□□□ -0.5
Q8VDP2 Gm45098-201ENSMUST00000207179 657 ntBASIC11.94□□□□□ -0.5
Q8VDP2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.94□□□□□ -0.5
Q8VDP2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Q8VDP2 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.94□□□□□ -0.5
Q8VDP2 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Q8VDP2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Q8VDP2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Q8VDP2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Q8VDP2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q8VDP2 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Q8VDP2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.93□□□□□ -0.5
Q8VDP2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.93□□□□□ -0.5
Q8VDP2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.93□□□□□ -0.5
Q8VDP2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Q8VDP2 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.93□□□□□ -0.5
Q8VDP2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.93□□□□□ -0.5
Q8VDP2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.93□□□□□ -0.5
Q8VDP2 Gm15957-201ENSMUST00000118893 974 ntBASIC11.93□□□□□ -0.5
Q8VDP2 Gm15483-201ENSMUST00000120338 456 ntBASIC11.93□□□□□ -0.5
Q8VDP2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.93□□□□□ -0.5
Q8VDP2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.93□□□□□ -0.5
Q8VDP2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Q8VDP2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Q8VDP2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms