Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps39Q8R5L3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vps39Q8R5L3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps39Q8R5L3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps39Q8R5L3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps39Q8R5L3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps39Q8R5L3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps39Q8R5L3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps39Q8R5L3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps39Q8R5L3 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.27□□□□□ -0.44
Vps39Q8R5L3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vps39Q8R5L3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps39Q8R5L3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.27□□□□□ -0.44
Vps39Q8R5L3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps39Q8R5L3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.27□□□□□ -0.45
Vps39Q8R5L3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps39Q8R5L3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Gm13226-201ENSMUST00000117838 404 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms