Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
H2afjQ8R1M2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afjQ8R1M2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afjQ8R1M2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afjQ8R1M2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afjQ8R1M2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afjQ8R1M2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afjQ8R1M2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afjQ8R1M2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afjQ8R1M2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afjQ8R1M2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afjQ8R1M2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afjQ8R1M2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afjQ8R1M2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afjQ8R1M2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm43818-201ENSMUST00000200605 466 ntBASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm7561-201ENSMUST00000211203 886 ntBASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm10268-201ENSMUST00000085340 555 ntBASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afjQ8R1M2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Gm42599-201ENSMUST00000201308 469 ntBASIC11.38□□□□□ -0.59
H2afjQ8R1M2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afjQ8R1M2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms