Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Snord83b-201ENSMUST00000104546 94 ntBASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Gm17208-201ENSMUST00000168388 535 ntBASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc28bQ8CEG5 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Mir6392-201ENSMUST00000184924 108 ntBASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Gm20949-201ENSMUST00000206478 952 ntBASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Gm44872-201ENSMUST00000207864 420 ntBASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Gm18624-201ENSMUST00000220966 658 ntBASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.11□□□□□ -0.47
Ccdc28bQ8CEG5 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm16479-201ENSMUST00000121706 932 ntBASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms