Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Gm12036-201ENSMUST00000120008 530 ntBASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Lysmd4Q8CC84 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gm13492-201ENSMUST00000119772 665 ntBASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gm8018-201ENSMUST00000173536 789 ntBASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gm10012-201ENSMUST00000078252 192 ntBASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms