Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Gm13097-201ENSMUST00000210722 397 ntBASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Gm15276-201ENSMUST00000145953 498 ntBASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Gm26083-201ENSMUST00000157904 193 ntBASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Gm45224-201ENSMUST00000208203 414 ntBASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc60Q8C4J0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm23912-201ENSMUST00000104687 87 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm25668-201ENSMUST00000157700 129 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm25890-201ENSMUST00000177643 165 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm22614-201ENSMUST00000178300 165 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm27390-201ENSMUST00000184516 176 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm9230-201ENSMUST00000188228 532 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm22042-201ENSMUST00000082989 165 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm26110-201ENSMUST00000083971 165 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc60Q8C4J0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms