Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Gm8805-201ENSMUST00000117848 313 ntBASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rft1Q8C3B8 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Gm13123-201ENSMUST00000122173 492 ntBASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Snora78-201ENSMUST00000158630 128 ntBASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Gm10146-201ENSMUST00000072739 309 ntBASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.98□□□□□ -0.65
Rft1Q8C3B8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms