Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptcd1Q8C2E4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptcd1Q8C2E4 Gm9873-201ENSMUST00000063891 1097 ntBASIC15.13■□□□□ 0.01
Ptcd1Q8C2E4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ptcd1Q8C2E4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptcd1Q8C2E4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptcd1Q8C2E4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ptcd1Q8C2E4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ptcd1Q8C2E4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Gm24891-201ENSMUST00000104391 136 ntBASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Gm15573-201ENSMUST00000119487 540 ntBASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Gm37905-201ENSMUST00000195310 341 ntBASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 AC125117.2-201ENSMUST00000228344 1140 ntBASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ptcd1Q8C2E4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Gm15703-201ENSMUST00000120250 880 ntBASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Gm23153-201ENSMUST00000175323 313 ntBASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Gm8492-201ENSMUST00000182375 987 ntBASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Gm10774-201ENSMUST00000188689 204 ntBASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Mir7686-201ENSMUST00000200604 57 ntBASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 AC174797.2-202ENSMUST00000225729 568 ntBASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Prrxl1-205ENSMUST00000228878 723 ntBASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ptcd1Q8C2E4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms