Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Gm23912-201ENSMUST00000104687 87 ntBASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Gm14263-201ENSMUST00000117955 746 ntBASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Gm18711-201ENSMUST00000199341 750 ntBASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Gm9062-201ENSMUST00000117712 727 ntBASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Gm13611-201ENSMUST00000118269 318 ntBASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Gm5369-201ENSMUST00000217499 588 ntBASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh3rf2Q8BZT2 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sh3rf2Q8BZT2 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms