Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm10169-201ENSMUST00000121822 348 ntBASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm43778-201ENSMUST00000199438 199 ntBASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm43912-201ENSMUST00000204352 538 ntBASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm18514-201ENSMUST00000218980 436 ntBASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm4811-201ENSMUST00000220879 1220 ntBASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 n-R5s185-201ENSMUST00000083953 119 ntBASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Gm12036-201ENSMUST00000120008 530 ntBASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Gm14441-201ENSMUST00000121960 540 ntBASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Gm6114-201ENSMUST00000182472 968 ntBASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Gm4978-201ENSMUST00000071565 801 ntBASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col16a1Q8BLX7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Col16a1Q8BLX7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col16a1Q8BLX7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col16a1Q8BLX7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col16a1Q8BLX7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col16a1Q8BLX7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col16a1Q8BLX7 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Gm45592-201ENSMUST00000209605 1043 ntBASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 AC114645.1-201ENSMUST00000215831 187 ntBASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Gm23105-201ENSMUST00000083719 134 ntBASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col16a1Q8BLX7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Gm14892-201ENSMUST00000117636 267 ntBASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Lgi3-203ENSMUST00000226548 1001 ntBASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Gm6655-201ENSMUST00000201932 1309 ntBASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Gm21358-201ENSMUST00000191645 1659 ntBASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms