Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Acot6-202ENSMUST00000222921 3622 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm14892-201ENSMUST00000117636 267 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm15374-201ENSMUST00000119313 844 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Mir8093-201ENSMUST00000185043 137 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm43692-201ENSMUST00000198236 1062 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm42816-201ENSMUST00000198433 325 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm44124-201ENSMUST00000204159 472 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 Gm4811-201ENSMUST00000220879 1220 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 AC129308.3-201ENSMUST00000225652 524 ntBASIC17.11■□□□□ 0.33
Usp54Q8BL06 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp54Q8BL06 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Usp54Q8BL06 AC093022.4-203ENSMUST00000228523 2657 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 AC116503.1-201ENSMUST00000215445 2192 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Gm6655-201ENSMUST00000201932 1309 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Gm10169-201ENSMUST00000121822 348 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Gm26134-201ENSMUST00000178484 110 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 Gm18776-201ENSMUST00000188833 654 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Gm30671-201ENSMUST00000214898 318 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 AC134869.4-202ENSMUST00000224350 837 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 CT030653.1-201ENSMUST00000224382 1279 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 CT009536.2-201ENSMUST00000225370 665 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp54Q8BL06 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC17.1■□□□□ 0.33
Usp54Q8BL06 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp54Q8BL06 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Gm12036-201ENSMUST00000120008 530 ntBASIC17.09■□□□□ 0.33
Usp54Q8BL06 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Gm8723-201ENSMUST00000166076 820 ntBASIC17.09■□□□□ 0.33
Usp54Q8BL06 Gm8701-201ENSMUST00000169259 874 ntBASIC17.09■□□□□ 0.33
Usp54Q8BL06 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp54Q8BL06 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 AC238811.4-201ENSMUST00000178019 1246 ntBASIC17.09■□□□□ 0.33
Usp54Q8BL06 AC238940.3-201ENSMUST00000178830 1246 ntBASIC17.09■□□□□ 0.33
Usp54Q8BL06 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Gm5982-201ENSMUST00000196234 512 ntBASIC17.09■□□□□ 0.33
Usp54Q8BL06 Gm44552-201ENSMUST00000205458 1247 ntBASIC17.09■□□□□ 0.33
Usp54Q8BL06 Gm39288-201ENSMUST00000210554 446 ntBASIC17.09■□□□□ 0.33
Usp54Q8BL06 AC165154.1-201ENSMUST00000226661 340 ntBASIC17.09■□□□□ 0.33
Usp54Q8BL06 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Usp54Q8BL06 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp54Q8BL06 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp54Q8BL06 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms