Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smg1Q8BKX6 AA623943-201ENSMUST00000121794 354 ntBASIC10.09□□□□□ -0.79
Smg1Q8BKX6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smg1Q8BKX6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smg1Q8BKX6 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.09□□□□□ -0.79
Smg1Q8BKX6 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC10.09□□□□□ -0.79
Smg1Q8BKX6 Gm28686-201ENSMUST00000187404 609 ntBASIC10.09□□□□□ -0.79
Smg1Q8BKX6 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.09□□□□□ -0.79
Smg1Q8BKX6 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smg1Q8BKX6 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smg1Q8BKX6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smg1Q8BKX6 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Smg1Q8BKX6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Smg1Q8BKX6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm25677-201ENSMUST00000174983 72 ntBASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm28833-201ENSMUST00000189671 559 ntBASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm5449-201ENSMUST00000081132 357 ntBASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm23612-201ENSMUST00000103823 110 ntBASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm23576-201ENSMUST00000179918 110 ntBASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smg1Q8BKX6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gm14807-201ENSMUST00000116640 983 ntBASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gm14270-201ENSMUST00000118388 846 ntBASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms