Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Gm13492-201ENSMUST00000119772 665 ntBASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Gm9794-201ENSMUST00000202370 423 ntBASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Gm24136-201ENSMUST00000083374 165 ntBASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chmp2bQ8BJF9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Gm44882-201ENSMUST00000205702 802 ntBASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Gm7561-201ENSMUST00000211203 886 ntBASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Gm5035-201ENSMUST00000215581 927 ntBASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp2bQ8BJF9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.55□□□□□ -0.4
Chmp2bQ8BJF9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms