Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.87□□□□□ -0.35
Ccdc40Q8BI79 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Gm14660-201ENSMUST00000119809 575 ntBASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Gm27731-201ENSMUST00000185192 107 ntBASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Gm18187-201ENSMUST00000196476 984 ntBASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.86□□□□□ -0.35
Ccdc40Q8BI79 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Gm16379-201ENSMUST00000161469 348 ntBASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Gm8762-201ENSMUST00000193486 339 ntBASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.85□□□□□ -0.35
Ccdc40Q8BI79 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms