Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Cog3-203ENSMUST00000227473 4197 ntBASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Gm13829-201ENSMUST00000119600 138 ntBASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Gm18304-201ENSMUST00000189162 546 ntBASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf38Q8BI21 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Gm27682-201ENSMUST00000183930 110 ntBASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Gm44882-201ENSMUST00000205702 802 ntBASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.85□□□□□ -0.51
Rnf38Q8BI21 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf38Q8BI21 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf38Q8BI21 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms