Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Gm14701-201ENSMUST00000117156 348 ntBASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc5a7Q8BGY9 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.71□□□□□ -0.7
Slc5a7Q8BGY9 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Slc5a7Q8BGY9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Slc5a7Q8BGY9 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.71□□□□□ -0.7
Slc5a7Q8BGY9 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Slc5a7Q8BGY9 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Slc5a7Q8BGY9 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Slc5a7Q8BGY9 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.71□□□□□ -0.7
Slc5a7Q8BGY9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Slc5a7Q8BGY9 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Gm15487-201ENSMUST00000122373 465 ntBASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Gm9022-201ENSMUST00000182482 992 ntBASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.7□□□□□ -0.7
Slc5a7Q8BGY9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms