Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm6023-201ENSMUST00000118217 606 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm43133-201ENSMUST00000197472 463 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm43930-201ENSMUST00000203868 845 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc116Q80X53 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.02□□□□□ -0.48
Ccdc116Q80X53 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc116Q80X53 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc116Q80X53 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.02□□□□□ -0.48
Ccdc116Q80X53 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc116Q80X53 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc116Q80X53 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc116Q80X53 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc116Q80X53 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc116Q80X53 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Gm13570-201ENSMUST00000140763 309 ntBASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Gm38002-201ENSMUST00000193255 180 ntBASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc116Q80X53 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Gm25043-201ENSMUST00000158604 212 ntBASIC12.01□□□□□ -0.49
Ccdc116Q80X53 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms