Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scaf4Q6PFF0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Gm7029-201ENSMUST00000173226 450 ntBASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Gm27437-201ENSMUST00000183429 107 ntBASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scaf4Q6PFF0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms