Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Gm17877-201ENSMUST00000192578 814 ntBASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Gm9996-201ENSMUST00000070359 913 ntBASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc85bQ6PDY0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Gm43184-201ENSMUST00000197247 542 ntBASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Gm2875-201ENSMUST00000211333 360 ntBASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc85bQ6PDY0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Gm18558-201ENSMUST00000186253 1214 ntBASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Gm43520-201ENSMUST00000197996 164 ntBASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Gm44980-201ENSMUST00000205826 314 ntBASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85bQ6PDY0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms