Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Gm38385-201ENSMUST00000194454 2351 ntBASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slx4Q6P1D7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Gm5780-201ENSMUST00000217774 1834 ntBASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Gm10807-201ENSMUST00000177134 795 ntBASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC18.53■□□□□ 0.56
Slx4Q6P1D7 Gm19680-201ENSMUST00000095050 1513 ntBASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Gm15615-201ENSMUST00000118876 198 ntBASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Gm6855-201ENSMUST00000206307 790 ntBASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Gm18294-201ENSMUST00000176980 1748 ntBASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slx4Q6P1D7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Slx4Q6P1D7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slx4Q6P1D7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gm13351-201ENSMUST00000118087 414 ntBASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gm17070-201ENSMUST00000170463 784 ntBASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gm9192-201ENSMUST00000183221 985 ntBASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gm7082-201ENSMUST00000209880 969 ntBASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gm43447-201ENSMUST00000198471 1535 ntBASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slx4Q6P1D7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Gm36970-201ENSMUST00000193688 1859 ntBASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Gm43334-201ENSMUST00000197740 1318 ntBASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Gm11578-201ENSMUST00000118530 459 ntBASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Gm6322-201ENSMUST00000118789 1004 ntBASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Gm12453-201ENSMUST00000121981 331 ntBASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms