Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sp140Q6NSQ5 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Gm8062-201ENSMUST00000139696 444 ntBASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Gm25043-201ENSMUST00000158604 212 ntBASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sp140Q6NSQ5 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Mir7085-201ENSMUST00000184353 66 ntBASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sp140Q6NSQ5 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms