Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Gm14579-201ENSMUST00000117068 283 ntBASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Gm11663-201ENSMUST00000117888 290 ntBASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Defa-ps4-201ENSMUST00000118021 183 ntBASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Gm12752-201ENSMUST00000121657 811 ntBASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Gm5656-201ENSMUST00000171020 1096 ntBASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Gm5621-201ENSMUST00000187303 640 ntBASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Gm17877-201ENSMUST00000192578 814 ntBASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Gm44683-201ENSMUST00000209088 484 ntBASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Gm9111-201ENSMUST00000219394 709 ntBASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf8Q6DID3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Gm25545-201ENSMUST00000122673 323 ntBASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Gm19640-201ENSMUST00000214849 464 ntBASIC14.38□□□□□ -0.11
Scaf8Q6DID3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.38□□□□□ -0.11
Scaf8Q6DID3 AC140375.1-201ENSMUST00000225421 694 ntBASIC14.38□□□□□ -0.11
Scaf8Q6DID3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf8Q6DID3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm26013-201ENSMUST00000104404 119 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm15352-201ENSMUST00000118696 270 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm15171-201ENSMUST00000122191 334 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm23119-201ENSMUST00000158610 140 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms