Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gli3Q61602 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Gli3Q61602 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Gli3Q61602 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gli3Q61602 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gli3Q61602 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC16.08■□□□□ 0.16
Gli3Q61602 Gm26313-201ENSMUST00000157770 308 ntBASIC16.08■□□□□ 0.16
Gli3Q61602 Gm5996-201ENSMUST00000211110 718 ntBASIC16.08■□□□□ 0.16
Gli3Q61602 AC107752.1-201ENSMUST00000219362 469 ntBASIC16.08■□□□□ 0.16
Gli3Q61602 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Gli3Q61602 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Gli3Q61602 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Gli3Q61602 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gli3Q61602 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gli3Q61602 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC16.07■□□□□ 0.16
Gli3Q61602 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC16.07■□□□□ 0.16
Gli3Q61602 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC16.07■□□□□ 0.16
Gli3Q61602 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Gli3Q61602 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC16.07■□□□□ 0.16
Gli3Q61602 Gm14113-201ENSMUST00000121399 976 ntBASIC16.07■□□□□ 0.16
Gli3Q61602 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Gm20493-201ENSMUST00000173706 213 ntBASIC16.07■□□□□ 0.16
Gli3Q61602 Gm23694-201ENSMUST00000179335 110 ntBASIC16.07■□□□□ 0.16
Gli3Q61602 Gm29543-201ENSMUST00000188138 967 ntBASIC16.07■□□□□ 0.16
Gli3Q61602 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Gm8255-201ENSMUST00000218693 305 ntBASIC16.07■□□□□ 0.16
Gli3Q61602 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC16.07■□□□□ 0.16
Gli3Q61602 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gli3Q61602 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Gli3Q61602 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC16.06■□□□□ 0.16
Gli3Q61602 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Gm6755-201ENSMUST00000100598 864 ntBASIC16.06■□□□□ 0.16
Gli3Q61602 Gm6740-201ENSMUST00000100617 864 ntBASIC16.06■□□□□ 0.16
Gli3Q61602 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Gli3Q61602 Gm12247-201ENSMUST00000117585 670 ntBASIC16.06■□□□□ 0.16
Gli3Q61602 Gm15549-201ENSMUST00000121595 622 ntBASIC16.06■□□□□ 0.16
Gli3Q61602 Gm4982-201ENSMUST00000160440 1098 ntBASIC16.06■□□□□ 0.16
Gli3Q61602 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Gli3Q61602 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Gli3Q61602 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Gli3Q61602 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC16.06■□□□□ 0.16
Gli3Q61602 Gm26782-203ENSMUST00000227103 751 ntBASIC16.06■□□□□ 0.16
Gli3Q61602 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Gli3Q61602 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Gli3Q61602 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Gli3Q61602 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Gli3Q61602 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gli3Q61602 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.06■□□□□ 0.16
Gli3Q61602 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gli3Q61602 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Gli3Q61602 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC16.05■□□□□ 0.16
Gli3Q61602 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gli3Q61602 Gm15610-201ENSMUST00000120584 195 ntBASIC16.05■□□□□ 0.16
Gli3Q61602 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gli3Q61602 Gm9372-201ENSMUST00000168454 430 ntBASIC16.05■□□□□ 0.16
Gli3Q61602 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gli3Q61602 Mir7051-201ENSMUST00000184167 73 ntBASIC16.05■□□□□ 0.16
Gli3Q61602 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC16.05■□□□□ 0.16
Gli3Q61602 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC16.05■□□□□ 0.16
Gli3Q61602 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gli3Q61602 AC103672.1-201ENSMUST00000227502 365 ntBASIC16.05■□□□□ 0.16
Gli3Q61602 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC16.05■□□□□ 0.16
Gli3Q61602 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gli3Q61602 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gli3Q61602 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms