Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Foxc1Q61572 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Foxc1Q61572 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.32□□□□□ -0.92
Foxc1Q61572 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Mir466f-3-201ENSMUST00000104788 94 ntBASIC9.32□□□□□ -0.92
Foxc1Q61572 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm13123-201ENSMUST00000122173 492 ntBASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC9.32□□□□□ -0.92
Foxc1Q61572 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm27039-201ENSMUST00000182438 962 ntBASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm38117-201ENSMUST00000194653 939 ntBASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm42964-201ENSMUST00000202965 382 ntBASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm18329-201ENSMUST00000215832 589 ntBASIC9.32□□□□□ -0.92
Foxc1Q61572 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.32□□□□□ -0.92
Foxc1Q61572 AC159293.2-201ENSMUST00000222289 424 ntBASIC9.32□□□□□ -0.92
Foxc1Q61572 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Foxc1Q61572 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.32□□□□□ -0.92
Foxc1Q61572 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.32□□□□□ -0.92
Foxc1Q61572 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms