Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.55□□□□□ -0.24
Ift88Q61371 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.55□□□□□ -0.24
Ift88Q61371 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.55□□□□□ -0.24
Ift88Q61371 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.55□□□□□ -0.24
Ift88Q61371 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ift88Q61371 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ift88Q61371 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.54□□□□□ -0.24
Ift88Q61371 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.54□□□□□ -0.24
Ift88Q61371 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.54□□□□□ -0.24
Ift88Q61371 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ift88Q61371 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Ift88Q61371 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ift88Q61371 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ift88Q61371 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Gm8738-201ENSMUST00000172606 329 ntBASIC13.54□□□□□ -0.24
Ift88Q61371 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.54□□□□□ -0.24
Ift88Q61371 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.54□□□□□ -0.24
Ift88Q61371 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.54□□□□□ -0.24
Ift88Q61371 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ift88Q61371 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ift88Q61371 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.54□□□□□ -0.24
Ift88Q61371 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ift88Q61371 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Ift88Q61371 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ift88Q61371 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.53□□□□□ -0.24
Ift88Q61371 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ift88Q61371 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ift88Q61371 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.53□□□□□ -0.24
Ift88Q61371 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Ift88Q61371 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.53□□□□□ -0.24
Ift88Q61371 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.53□□□□□ -0.24
Ift88Q61371 Gm13736-201ENSMUST00000119272 253 ntBASIC13.53□□□□□ -0.24
Ift88Q61371 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.53□□□□□ -0.24
Ift88Q61371 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.53□□□□□ -0.24
Ift88Q61371 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ift88Q61371 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ift88Q61371 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ift88Q61371 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.53□□□□□ -0.24
Ift88Q61371 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ift88Q61371 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.53□□□□□ -0.24
Ift88Q61371 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ift88Q61371 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ift88Q61371 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ift88Q61371 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ift88Q61371 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ift88Q61371 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ift88Q61371 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ift88Q61371 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms