Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col12a1Q60847 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col12a1Q60847 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col12a1Q60847 Gm5395-201ENSMUST00000121650 915 ntBASIC11.77□□□□□ -0.52
Col12a1Q60847 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC11.77□□□□□ -0.52
Col12a1Q60847 Gm5706-201ENSMUST00000181525 993 ntBASIC11.77□□□□□ -0.52
Col12a1Q60847 Gm26957-201ENSMUST00000182645 977 ntBASIC11.77□□□□□ -0.52
Col12a1Q60847 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.77□□□□□ -0.52
Col12a1Q60847 BC080696-201ENSMUST00000202858 1218 ntBASIC11.77□□□□□ -0.52
Col12a1Q60847 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
Col12a1Q60847 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col12a1Q60847 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.77□□□□□ -0.52
Col12a1Q60847 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col12a1Q60847 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col12a1Q60847 Gm9791-201ENSMUST00000060997 447 ntBASIC11.77□□□□□ -0.52
Col12a1Q60847 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Col12a1Q60847 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Col12a1Q60847 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Col12a1Q60847 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col12a1Q60847 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Col12a1Q60847 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col12a1Q60847 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col12a1Q60847 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Col12a1Q60847 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col12a1Q60847 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col12a1Q60847 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col12a1Q60847 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.77□□□□□ -0.52
Col12a1Q60847 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col12a1Q60847 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.77□□□□□ -0.52
Col12a1Q60847 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.77□□□□□ -0.53
Col12a1Q60847 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Gm23439-201ENSMUST00000104292 132 ntBASIC11.77□□□□□ -0.53
Col12a1Q60847 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC11.77□□□□□ -0.53
Col12a1Q60847 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Col12a1Q60847 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.77□□□□□ -0.53
Col12a1Q60847 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Col12a1Q60847 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Map1b-203ENSMUST00000223725 2669 ntBASIC11.77□□□□□ -0.53
Col12a1Q60847 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.77□□□□□ -0.53
Col12a1Q60847 Gm25394-201ENSMUST00000157338 133 ntBASIC11.77□□□□□ -0.53
Col12a1Q60847 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.77□□□□□ -0.53
Col12a1Q60847 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.77□□□□□ -0.53
Col12a1Q60847 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col12a1Q60847 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.76□□□□□ -0.53
Col12a1Q60847 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col12a1Q60847 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Col12a1Q60847 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.76□□□□□ -0.53
Col12a1Q60847 Gm18552-201ENSMUST00000187425 538 ntBASIC11.76□□□□□ -0.53
Col12a1Q60847 Gm18711-201ENSMUST00000199341 750 ntBASIC11.76□□□□□ -0.53
Col12a1Q60847 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.76□□□□□ -0.53
Col12a1Q60847 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col12a1Q60847 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.76□□□□□ -0.53
Col12a1Q60847 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.76□□□□□ -0.53
Col12a1Q60847 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.76□□□□□ -0.53
Col12a1Q60847 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.76□□□□□ -0.53
Col12a1Q60847 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.76□□□□□ -0.53
Col12a1Q60847 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Col12a1Q60847 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col12a1Q60847 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.76□□□□□ -0.53
Col12a1Q60847 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Gm6304-201ENSMUST00000096579 447 ntBASIC11.76□□□□□ -0.53
Col12a1Q60847 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.76□□□□□ -0.53
Col12a1Q60847 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col12a1Q60847 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms