Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.59□□□□□ -0.55
Tnfaip3Q60769 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfaip3Q60769 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfaip3Q60769 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfaip3Q60769 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfaip3Q60769 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfaip3Q60769 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfaip3Q60769 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfaip3Q60769 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.58□□□□□ -0.55
Tnfaip3Q60769 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfaip3Q60769 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfaip3Q60769 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm24934-201ENSMUST00000103764 111 ntBASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm14130-201ENSMUST00000118417 987 ntBASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm26361-201ENSMUST00000158868 186 ntBASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.58□□□□□ -0.56
Tnfaip3Q60769 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfaip3Q60769 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.57□□□□□ -0.56
Tnfaip3Q60769 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Gm6963-201ENSMUST00000147879 379 ntBASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Gm5070-201ENSMUST00000177599 862 ntBASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Rprl1-202ENSMUST00000198476 238 ntBASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Gzmn-202ENSMUST00000225535 989 ntBASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Gm9996-201ENSMUST00000070359 913 ntBASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Mir433-201ENSMUST00000093564 124 ntBASIC11.57□□□□□ -0.56
Tnfaip3Q60769 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfaip3Q60769 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms