Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ClpbQ60649 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.79□□□□□ -0.52
ClpbQ60649 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.79□□□□□ -0.52
ClpbQ60649 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.79□□□□□ -0.52
ClpbQ60649 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ClpbQ60649 Gm27023-201ENSMUST00000182372 285 ntBASIC11.79□□□□□ -0.52
ClpbQ60649 Gm27390-201ENSMUST00000184516 176 ntBASIC11.79□□□□□ -0.52
ClpbQ60649 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.79□□□□□ -0.52
ClpbQ60649 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.79□□□□□ -0.52
ClpbQ60649 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ClpbQ60649 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ClpbQ60649 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ClpbQ60649 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.78□□□□□ -0.52
ClpbQ60649 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.78□□□□□ -0.52
ClpbQ60649 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
ClpbQ60649 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
ClpbQ60649 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Gm24231-201ENSMUST00000104315 133 ntBASIC11.78□□□□□ -0.52
ClpbQ60649 Gm24255-201ENSMUST00000104481 128 ntBASIC11.78□□□□□ -0.52
ClpbQ60649 Gm12058-201ENSMUST00000118614 437 ntBASIC11.78□□□□□ -0.52
ClpbQ60649 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ClpbQ60649 Gm8018-201ENSMUST00000173536 789 ntBASIC11.78□□□□□ -0.52
ClpbQ60649 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.78□□□□□ -0.52
ClpbQ60649 Gm37201-201ENSMUST00000191845 523 ntBASIC11.78□□□□□ -0.52
ClpbQ60649 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.78□□□□□ -0.52
ClpbQ60649 Gm31256-201ENSMUST00000194705 506 ntBASIC11.78□□□□□ -0.52
ClpbQ60649 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.78□□□□□ -0.52
ClpbQ60649 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.78□□□□□ -0.52
ClpbQ60649 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.78□□□□□ -0.52
ClpbQ60649 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.78□□□□□ -0.52
ClpbQ60649 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ClpbQ60649 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ClpbQ60649 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.78□□□□□ -0.52
ClpbQ60649 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
ClpbQ60649 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ClpbQ60649 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
ClpbQ60649 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ClpbQ60649 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ClpbQ60649 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
ClpbQ60649 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
ClpbQ60649 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
ClpbQ60649 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ClpbQ60649 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ClpbQ60649 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.77□□□□□ -0.52
ClpbQ60649 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
ClpbQ60649 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
ClpbQ60649 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
ClpbQ60649 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ClpbQ60649 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.77□□□□□ -0.53
ClpbQ60649 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Gm14726-201ENSMUST00000120623 896 ntBASIC11.77□□□□□ -0.53
ClpbQ60649 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.77□□□□□ -0.53
ClpbQ60649 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.77□□□□□ -0.53
ClpbQ60649 Gm26083-201ENSMUST00000157904 193 ntBASIC11.77□□□□□ -0.53
ClpbQ60649 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
ClpbQ60649 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ClpbQ60649 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
ClpbQ60649 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms