Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Gm13492-201ENSMUST00000119772 665 ntBASIC11.7□□□□□ -0.54
Nr1h4Q60641 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.7□□□□□ -0.54
Nr1h4Q60641 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Gm38092-201ENSMUST00000195600 653 ntBASIC11.7□□□□□ -0.54
Nr1h4Q60641 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.7□□□□□ -0.54
Nr1h4Q60641 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Gm32025-201ENSMUST00000217960 307 ntBASIC11.7□□□□□ -0.54
Nr1h4Q60641 Gm10012-201ENSMUST00000078252 192 ntBASIC11.7□□□□□ -0.54
Nr1h4Q60641 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nr1h4Q60641 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.69□□□□□ -0.54
Nr1h4Q60641 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Gm5866-201ENSMUST00000177881 973 ntBASIC11.69□□□□□ -0.54
Nr1h4Q60641 Gm24196-201ENSMUST00000179161 110 ntBASIC11.69□□□□□ -0.54
Nr1h4Q60641 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Gm17794-201ENSMUST00000220252 955 ntBASIC11.69□□□□□ -0.54
Nr1h4Q60641 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.69□□□□□ -0.54
Nr1h4Q60641 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.69□□□□□ -0.54
Nr1h4Q60641 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.69□□□□□ -0.54
Nr1h4Q60641 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nr1h4Q60641 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.68□□□□□ -0.54
Nr1h4Q60641 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Gm12091-201ENSMUST00000146791 830 ntBASIC11.68□□□□□ -0.54
Nr1h4Q60641 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Gm8515-201ENSMUST00000194852 576 ntBASIC11.68□□□□□ -0.54
Nr1h4Q60641 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nr1h4Q60641 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms