Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Pck2-205ENSMUST00000226352 2784 ntBASIC13.06□□□□□ -0.32
Shroom1Q5SX79 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shroom1Q5SX79 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Gm18734-201ENSMUST00000172937 808 ntBASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 AU022133-201ENSMUST00000200601 873 ntBASIC13.05□□□□□ -0.32
Shroom1Q5SX79 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Gm43947-201ENSMUST00000203019 959 ntBASIC13.05□□□□□ -0.32
Shroom1Q5SX79 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.05□□□□□ -0.32
Shroom1Q5SX79 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm11331-201ENSMUST00000119764 288 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm5616-201ENSMUST00000165252 384 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm8741-201ENSMUST00000174736 384 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm29615-201ENSMUST00000185371 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm28224-201ENSMUST00000186078 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm29001-201ENSMUST00000186177 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm28292-201ENSMUST00000186593 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm28101-201ENSMUST00000187608 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm29076-201ENSMUST00000187689 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm28302-201ENSMUST00000187931 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm28646-201ENSMUST00000188220 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm28205-201ENSMUST00000189177 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm29032-201ENSMUST00000189797 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm28695-201ENSMUST00000190300 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm37448-201ENSMUST00000192795 697 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm9996-201ENSMUST00000070359 913 ntBASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms