Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm25857-201ENSMUST00000082788 129 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5d-4Q5R1F6 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Gm43133-201ENSMUST00000197472 463 ntBASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Gm18062-201ENSMUST00000208020 547 ntBASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Gm18055-201ENSMUST00000208254 547 ntBASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav5d-4Q5R1F6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5d-4Q5R1F6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5d-4Q5R1F6 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5d-4Q5R1F6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.52□□□□□ -0.72
Trav5d-4Q5R1F6 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5d-4Q5R1F6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5d-4Q5R1F6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Mir1247-201ENSMUST00000116706 82 ntBASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Gm12058-201ENSMUST00000118614 437 ntBASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Gm14999-201ENSMUST00000121039 624 ntBASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Trav5d-4Q5R1F6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms