Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm22138-201ENSMUST00000158748 128 ntBASIC11.3□□□□□ -0.6
Urb1Q571H0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.3□□□□□ -0.6
Urb1Q571H0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Gm17831-201ENSMUST00000205579 900 ntBASIC11.3□□□□□ -0.6
Urb1Q571H0 Gm19187-201ENSMUST00000206781 892 ntBASIC11.3□□□□□ -0.6
Urb1Q571H0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Urb1Q571H0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Gm37028-201ENSMUST00000194276 107 ntBASIC11.3□□□□□ -0.6
Urb1Q571H0 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.3□□□□□ -0.6
Urb1Q571H0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.3□□□□□ -0.6
Urb1Q571H0 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.3□□□□□ -0.6
Urb1Q571H0 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.3□□□□□ -0.6
Urb1Q571H0 Gm9996-201ENSMUST00000070359 913 ntBASIC11.3□□□□□ -0.6
Urb1Q571H0 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Urb1Q571H0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Urb1Q571H0 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.29□□□□□ -0.6
Urb1Q571H0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Gm13809-201ENSMUST00000117921 597 ntBASIC11.29□□□□□ -0.6
Urb1Q571H0 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.29□□□□□ -0.6
Urb1Q571H0 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.29□□□□□ -0.6
Urb1Q571H0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.29□□□□□ -0.6
Urb1Q571H0 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.29□□□□□ -0.6
Urb1Q571H0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.29□□□□□ -0.6
Urb1Q571H0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Gm14724-201ENSMUST00000118400 537 ntBASIC11.29□□□□□ -0.6
Urb1Q571H0 Gm8199-201ENSMUST00000121323 823 ntBASIC11.29□□□□□ -0.6
Urb1Q571H0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Gm17889-201ENSMUST00000198410 598 ntBASIC11.29□□□□□ -0.6
Urb1Q571H0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms