Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Gm7666-201ENSMUST00000146631 819 ntBASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Gm6905-201ENSMUST00000205729 511 ntBASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Gm807-202ENSMUST00000224929 408 ntBASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx49Q4FZF3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Gm24934-201ENSMUST00000103764 111 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Gm29155-201ENSMUST00000185910 269 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Gm4607-201ENSMUST00000206649 577 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Gm9463-201ENSMUST00000206707 601 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Gm5455-201ENSMUST00000058710 715 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Gm26448-201ENSMUST00000082446 203 ntBASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx49Q4FZF3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Gm24891-201ENSMUST00000104391 136 ntBASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Gm10774-201ENSMUST00000188689 204 ntBASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Gm3332-201ENSMUST00000189337 928 ntBASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Gm45398-201ENSMUST00000210561 165 ntBASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx49Q4FZF3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms