Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm22331-201ENSMUST00000158066 136 ntBASIC12.73□□□□□ -0.37
Trim80Q3V061 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.73□□□□□ -0.37
Trim80Q3V061 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim80Q3V061 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim80Q3V061 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim80Q3V061 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trim80Q3V061 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim80Q3V061 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim80Q3V061 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim80Q3V061 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.73□□□□□ -0.37
Trim80Q3V061 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trim80Q3V061 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.72□□□□□ -0.37
Trim80Q3V061 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim80Q3V061 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim80Q3V061 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim80Q3V061 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim80Q3V061 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim80Q3V061 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim80Q3V061 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim80Q3V061 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trim80Q3V061 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim80Q3V061 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim80Q3V061 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.71□□□□□ -0.37
Trim80Q3V061 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trim80Q3V061 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim80Q3V061 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim80Q3V061 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim80Q3V061 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Gm23931-201ENSMUST00000103842 109 ntBASIC12.71□□□□□ -0.37
Trim80Q3V061 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.71□□□□□ -0.37
Trim80Q3V061 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trim80Q3V061 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Trim80Q3V061 Gm6152-201ENSMUST00000151704 340 ntBASIC12.71□□□□□ -0.37
Trim80Q3V061 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Trim80Q3V061 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trim80Q3V061 Gm42550-201ENSMUST00000201553 960 ntBASIC12.71□□□□□ -0.37
Trim80Q3V061 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim80Q3V061 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.71□□□□□ -0.37
Trim80Q3V061 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim80Q3V061 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim80Q3V061 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim80Q3V061 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim80Q3V061 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim80Q3V061 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim80Q3V061 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim80Q3V061 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim80Q3V061 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim80Q3V061 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim80Q3V061 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim80Q3V061 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim80Q3V061 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim80Q3V061 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim80Q3V061 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms