Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Gm18473-201ENSMUST00000220543 868 ntBASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.48□□□□□ -0.57
Trim40Q3UWA4 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim40Q3UWA4 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Gm44882-201ENSMUST00000205702 802 ntBASIC11.47□□□□□ -0.57
Trim40Q3UWA4 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.47□□□□□ -0.57
Trim40Q3UWA4 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Trim40Q3UWA4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Gm12859-201ENSMUST00000117834 427 ntBASIC11.46□□□□□ -0.57
Trim40Q3UWA4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Gm16296-201ENSMUST00000159905 325 ntBASIC11.46□□□□□ -0.57
Trim40Q3UWA4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms