Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vars2Q3U2A8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Vars2Q3U2A8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vars2Q3U2A8 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vars2Q3U2A8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Vars2Q3U2A8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.1■□□□□ 0.01
Vars2Q3U2A8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm18294-201ENSMUST00000176980 1748 ntBASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm18798-201ENSMUST00000187264 1700 ntBASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm12791-201ENSMUST00000120788 655 ntBASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm11244-201ENSMUST00000121243 237 ntBASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm15620-201ENSMUST00000122949 270 ntBASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm12906-201ENSMUST00000154610 441 ntBASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Gm39288-201ENSMUST00000210554 446 ntBASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vars2Q3U2A8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gm21358-201ENSMUST00000191645 1659 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gm11996-201ENSMUST00000117538 915 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gm11957-201ENSMUST00000118304 779 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gm13445-201ENSMUST00000121664 307 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gm23675-201ENSMUST00000157311 125 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gm8459-201ENSMUST00000162504 760 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gm9034-201ENSMUST00000182071 1005 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gm45085-201ENSMUST00000209100 441 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 CT009546.1-201ENSMUST00000222573 1120 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gm10263-201ENSMUST00000085163 300 ntBASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vars2Q3U2A8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Vars2Q3U2A8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vars2Q3U2A8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vars2Q3U2A8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vars2Q3U2A8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vars2Q3U2A8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Vars2Q3U2A8 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vars2Q3U2A8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Vars2Q3U2A8 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
Vars2Q3U2A8 Gm25509-201ENSMUST00000116985 106 ntBASIC15.08■□□□□ 0
Vars2Q3U2A8 Gm9673-201ENSMUST00000119287 781 ntBASIC15.08■□□□□ 0
Vars2Q3U2A8 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vars2Q3U2A8 Gm14034-201ENSMUST00000120147 551 ntBASIC15.08■□□□□ 0
Vars2Q3U2A8 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vars2Q3U2A8 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms