Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Q3KNL4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.04□□□□□ -0.48
Q3KNL4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Q3KNL4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Q3KNL4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.03□□□□□ -0.48
Q3KNL4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.03□□□□□ -0.48
Q3KNL4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Q3KNL4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Q3KNL4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Map1b-203ENSMUST00000223725 2669 ntBASIC12.03□□□□□ -0.48
Q3KNL4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.03□□□□□ -0.48
Q3KNL4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.03□□□□□ -0.48
Q3KNL4 Gm16177-201ENSMUST00000120728 718 ntBASIC12.03□□□□□ -0.48
Q3KNL4 Gm11597-201ENSMUST00000121423 964 ntBASIC12.03□□□□□ -0.48
Q3KNL4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.03□□□□□ -0.48
Q3KNL4 Gm42599-201ENSMUST00000201308 469 ntBASIC12.03□□□□□ -0.48
Q3KNL4 Gm18584-201ENSMUST00000203098 964 ntBASIC12.03□□□□□ -0.48
Q3KNL4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Gm40466-201ENSMUST00000212174 422 ntBASIC12.03□□□□□ -0.48
Q3KNL4 Gm45925-201ENSMUST00000218882 744 ntBASIC12.03□□□□□ -0.48
Q3KNL4 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.03□□□□□ -0.48
Q3KNL4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.03□□□□□ -0.48
Q3KNL4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Q3KNL4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Q3KNL4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.03□□□□□ -0.48
Q3KNL4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Q3KNL4 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.02□□□□□ -0.48
Q3KNL4 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3KNL4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.02□□□□□ -0.48
Q3KNL4 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Q3KNL4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Q3KNL4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3KNL4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Q3KNL4 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Q3KNL4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3KNL4 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Q3KNL4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.02□□□□□ -0.48
Q3KNL4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3KNL4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Q3KNL4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Q3KNL4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.02□□□□□ -0.49
Q3KNL4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.02□□□□□ -0.49
Q3KNL4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.02□□□□□ -0.49
Q3KNL4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Q3KNL4 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.02□□□□□ -0.49
Q3KNL4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Gm8018-201ENSMUST00000173536 789 ntBASIC12.02□□□□□ -0.49
Q3KNL4 Gm44882-201ENSMUST00000205702 802 ntBASIC12.02□□□□□ -0.49
Q3KNL4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.02□□□□□ -0.49
Q3KNL4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.02□□□□□ -0.49
Q3KNL4 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Q3KNL4 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Q3KNL4 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Q3KNL4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3KNL4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms