Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cux2P70298 Gm7741-201ENSMUST00000181445 989 ntBASIC19.68■□□□□ 0.74
Cux2P70298 AC164087.2-201ENSMUST00000216206 1072 ntBASIC19.68■□□□□ 0.74
Cux2P70298 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cux2P70298 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cux2P70298 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cux2P70298 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cux2P70298 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC19.67■□□□□ 0.74
Cux2P70298 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Cux2P70298 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Gm8155-201ENSMUST00000216363 1612 ntBASIC19.67■□□□□ 0.74
Cux2P70298 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC19.67■□□□□ 0.74
Cux2P70298 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cux2P70298 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cux2P70298 Gm15196-201ENSMUST00000121406 482 ntBASIC19.67■□□□□ 0.74
Cux2P70298 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Gm25492-201ENSMUST00000157383 129 ntBASIC19.67■□□□□ 0.74
Cux2P70298 Gm9162-201ENSMUST00000182081 991 ntBASIC19.67■□□□□ 0.74
Cux2P70298 Gm37197-201ENSMUST00000195607 401 ntBASIC19.67■□□□□ 0.74
Cux2P70298 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC19.67■□□□□ 0.74
Cux2P70298 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC19.67■□□□□ 0.74
Cux2P70298 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cux2P70298 Zkscan3-207ENSMUST00000223831 2101 ntBASIC19.66■□□□□ 0.74
Cux2P70298 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC19.66■□□□□ 0.74
Cux2P70298 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Gm14234-201ENSMUST00000119539 845 ntBASIC19.66■□□□□ 0.74
Cux2P70298 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC19.66■□□□□ 0.74
Cux2P70298 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC19.66■□□□□ 0.74
Cux2P70298 Gm6331-201ENSMUST00000217890 450 ntBASIC19.66■□□□□ 0.74
Cux2P70298 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cux2P70298 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cux2P70298 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Gm8038-201ENSMUST00000164674 2044 ntBASIC19.65■□□□□ 0.74
Cux2P70298 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cux2P70298 Gm14497-201ENSMUST00000119537 580 ntBASIC19.65■□□□□ 0.74
Cux2P70298 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC19.65■□□□□ 0.74
Cux2P70298 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC19.65■□□□□ 0.74
Cux2P70298 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC19.65■□□□□ 0.74
Cux2P70298 Gm4978-201ENSMUST00000071565 801 ntBASIC19.65■□□□□ 0.74
Cux2P70298 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cux2P70298 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Cux2P70298 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC19.65■□□□□ 0.74
Cux2P70298 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cux2P70298 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cux2P70298 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Cux2P70298 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cux2P70298 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cux2P70298 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Cux2P70298 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cux2P70298 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cux2P70298 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cux2P70298 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cux2P70298 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cux2P70298 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cux2P70298 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cux2P70298 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cux2P70298 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cux2P70298 Gm45481-201ENSMUST00000209717 877 ntBASIC19.64■□□□□ 0.73
Cux2P70298 Gm7525-201ENSMUST00000219425 454 ntBASIC19.64■□□□□ 0.73
Cux2P70298 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cux2P70298 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms