Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crnkl1P63154 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.15□□□□□ -0.47
Crnkl1P63154 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Crnkl1P63154 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.14□□□□□ -0.47
Crnkl1P63154 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Crnkl1P63154 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.14□□□□□ -0.47
Crnkl1P63154 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.14□□□□□ -0.47
Crnkl1P63154 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Crnkl1P63154 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.14□□□□□ -0.47
Crnkl1P63154 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Crnkl1P63154 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.14□□□□□ -0.47
Crnkl1P63154 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.14□□□□□ -0.47
Crnkl1P63154 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Crnkl1P63154 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Crnkl1P63154 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.14□□□□□ -0.47
Crnkl1P63154 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Crnkl1P63154 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Gm5356-201ENSMUST00000093326 615 ntBASIC12.14□□□□□ -0.47
Crnkl1P63154 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Crnkl1P63154 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.14□□□□□ -0.47
Crnkl1P63154 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crnkl1P63154 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Crnkl1P63154 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Crnkl1P63154 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.13□□□□□ -0.47
Crnkl1P63154 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Crnkl1P63154 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Crnkl1P63154 Gm12928-201ENSMUST00000117115 573 ntBASIC12.13□□□□□ -0.47
Crnkl1P63154 Gm17794-201ENSMUST00000220252 955 ntBASIC12.13□□□□□ -0.47
Crnkl1P63154 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.13□□□□□ -0.47
Crnkl1P63154 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Crnkl1P63154 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Crnkl1P63154 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Crnkl1P63154 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crnkl1P63154 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.13□□□□□ -0.47
Crnkl1P63154 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.12□□□□□ -0.47
Crnkl1P63154 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.12□□□□□ -0.47
Crnkl1P63154 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.12□□□□□ -0.47
Crnkl1P63154 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Crnkl1P63154 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.12□□□□□ -0.47
Crnkl1P63154 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.12□□□□□ -0.47
Crnkl1P63154 Mir686-201ENSMUST00000102174 109 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms