Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.56□□□□□ -0.4
Ybx1P62960 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.56□□□□□ -0.4
Ybx1P62960 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ybx1P62960 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Gm7722-201ENSMUST00000120646 741 ntBASIC12.56□□□□□ -0.4
Ybx1P62960 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.56□□□□□ -0.4
Ybx1P62960 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.56□□□□□ -0.4
Ybx1P62960 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.56□□□□□ -0.4
Ybx1P62960 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.56□□□□□ -0.4
Ybx1P62960 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.56□□□□□ -0.4
Ybx1P62960 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.56□□□□□ -0.4
Ybx1P62960 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.56□□□□□ -0.4
Ybx1P62960 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.56□□□□□ -0.4
Ybx1P62960 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.56□□□□□ -0.4
Ybx1P62960 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ybx1P62960 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.56□□□□□ -0.4
Ybx1P62960 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ybx1P62960 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.56□□□□□ -0.4
Ybx1P62960 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ybx1P62960 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.55□□□□□ -0.4
Ybx1P62960 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.55□□□□□ -0.4
Ybx1P62960 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ybx1P62960 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ybx1P62960 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm11509-201ENSMUST00000117358 325 ntBASIC12.55□□□□□ -0.4
Ybx1P62960 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.55□□□□□ -0.4
Ybx1P62960 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm14760-201ENSMUST00000121831 999 ntBASIC12.55□□□□□ -0.4
Ybx1P62960 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.55□□□□□ -0.4
Ybx1P62960 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.55□□□□□ -0.4
Ybx1P62960 Gm3332-201ENSMUST00000189337 928 ntBASIC12.55□□□□□ -0.4
Ybx1P62960 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.55□□□□□ -0.4
Ybx1P62960 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm4482-201ENSMUST00000200876 742 ntBASIC12.55□□□□□ -0.4
Ybx1P62960 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm807-202ENSMUST00000224929 408 ntBASIC12.55□□□□□ -0.4
Ybx1P62960 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ybx1P62960 Gm10179-201ENSMUST00000086233 688 ntBASIC12.55□□□□□ -0.4
Ybx1P62960 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ybx1P62960 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.55□□□□□ -0.4
Ybx1P62960 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ybx1P62960 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Matn2-203ENSMUST00000226766 3252 ntBASIC12.54□□□□□ -0.4
Ybx1P62960 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ybx1P62960 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ybx1P62960 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ybx1P62960 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms